Journal Article

Searching for the causal effects of body mass index in over 300 000 participants in UK Biobank, using Mendelian randomization

Davies, Neil M., Millard, Louise A. C., Gaunt, Tom R., Tilling, Kate, Davey Smith, George

2019

Overview

Mendelian randomization (MR) has been used to estimate the causal effect of body mass index (BMI) on particular traits thought to be affected by BMI. However, BMI may also be a modifiable, causal risk factor for outcomes where there is no prior reason to suggest that a causal effect exists. We performed a MR phenome-wide association study (MR-pheWAS) to search for the causal effects of BMI in UK Biobank (n = 334 968), using the PHESANT open-source phenome scan tool. A subset of identified associations were followed up with a formal two-stage instrumental variable analysis in UK Biobank, to estimate the causal effect of BMI on these phenotypes. Of the 22 922 tests performed, our MR-pheWAS identified 587 associations below a stringent P value threshold corresponding to a 5% estimated false discovery rate. These included many previously identified causal effects, for instance, an adverse effect of higher BMI on risk of diabetes and hypertension. We also identified several novel effects, including protective effects of higher BMI on a set of psychosocial traits, identified initially in our preliminary MR-pheWAS in circa 115,000 UK Biobank participants and replicated in a different subset of circa 223,000 UK Biobank participants. Our comprehensive MR-pheWAS identified potential causal effects of BMI on a large and diverse set of phenotypes. This included both previously identified causal effects, and novel effects such as a protective effect of higher BMI on feelings of nervousness.

• Publisher: Public Library of Science,Public Library of Science (PLoS)
• Subject: Adiposity - genetics / Adult / Aged / Analysis / Anxiety - genetics / Bias / Biological Specimen Banks / Biology and Life Sciences / Body Mass Index / Cardiovascular disease / Causal inference / Cohort Studies / Diabetes mellitus / Epidemiology / Female / Gene banks / Genetic aspects / Genetic Association Studies / Genetic Predisposition to Disease / Genetic research / Genomes / Genotype & phenotype / Health sciences / Humans / Hypotheses / Influence / Male / Medical schools / Medicine and Health Sciences / Mendelian Randomization Analysis / Middle Aged / Obesity / Phenotype / Phenotypes / Physical Sciences / Polymorphism, Single Nucleotide / Population / Prospective Studies / Randomization / Research and Analysis Methods / Risk Factors / Social Sciences / Studies / United Kingdom