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Structural basis for HIV-1 capsid adaption to a deficiency in IP6 packaging
by
Zhu, Yanan
, Lucic, Anka
, Shen, Yao
, Perilla, Juan R.
, Shen, Juan
, Zhang, Peijun
, Rey, Juan S.
, Chen, Long
, Kleinpeter, Alex B.
, Xu, Jialu
, Hardenbrook, Nathan
, Freed, Eric O.
in
101/28
/ 631/326/596/2148
/ 631/45
/ 631/535
/ 631/535/1258/1260
/ 631/57
/ Amino acids
/ C-Terminus
/ Capsid - chemistry
/ Capsid - metabolism
/ Capsid - ultrastructure
/ Capsid protein
/ Capsid Proteins - chemistry
/ Capsid Proteins - genetics
/ Capsid Proteins - metabolism
/ Cryoelectron Microscopy
/ Deficient mutant
/ Enzymes
/ gag Gene Products, Human Immunodeficiency Virus - chemistry
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ Hexamers
/ HIV
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ HIV-1 - physiology
/ Human immunodeficiency virus
/ Humanities and Social Sciences
/ Humans
/ Infections
/ Infectivity
/ Inositol
/ Inositols
/ Molecular dynamics
/ Molecular Dynamics Simulation
/ multidisciplinary
/ Mutation
/ Packaging
/ Phytic Acid - metabolism
/ Proteins
/ Science
/ Science (multidisciplinary)
/ Virion - metabolism
/ Virions
/ Virus Assembly - genetics
/ Viruses
2025
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Structural basis for HIV-1 capsid adaption to a deficiency in IP6 packaging
by
Zhu, Yanan
, Lucic, Anka
, Shen, Yao
, Perilla, Juan R.
, Shen, Juan
, Zhang, Peijun
, Rey, Juan S.
, Chen, Long
, Kleinpeter, Alex B.
, Xu, Jialu
, Hardenbrook, Nathan
, Freed, Eric O.
in
101/28
/ 631/326/596/2148
/ 631/45
/ 631/535
/ 631/535/1258/1260
/ 631/57
/ Amino acids
/ C-Terminus
/ Capsid - chemistry
/ Capsid - metabolism
/ Capsid - ultrastructure
/ Capsid protein
/ Capsid Proteins - chemistry
/ Capsid Proteins - genetics
/ Capsid Proteins - metabolism
/ Cryoelectron Microscopy
/ Deficient mutant
/ Enzymes
/ gag Gene Products, Human Immunodeficiency Virus - chemistry
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ Hexamers
/ HIV
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ HIV-1 - physiology
/ Human immunodeficiency virus
/ Humanities and Social Sciences
/ Humans
/ Infections
/ Infectivity
/ Inositol
/ Inositols
/ Molecular dynamics
/ Molecular Dynamics Simulation
/ multidisciplinary
/ Mutation
/ Packaging
/ Phytic Acid - metabolism
/ Proteins
/ Science
/ Science (multidisciplinary)
/ Virion - metabolism
/ Virions
/ Virus Assembly - genetics
/ Viruses
2025
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Structural basis for HIV-1 capsid adaption to a deficiency in IP6 packaging
by
Zhu, Yanan
, Lucic, Anka
, Shen, Yao
, Perilla, Juan R.
, Shen, Juan
, Zhang, Peijun
, Rey, Juan S.
, Chen, Long
, Kleinpeter, Alex B.
, Xu, Jialu
, Hardenbrook, Nathan
, Freed, Eric O.
in
101/28
/ 631/326/596/2148
/ 631/45
/ 631/535
/ 631/535/1258/1260
/ 631/57
/ Amino acids
/ C-Terminus
/ Capsid - chemistry
/ Capsid - metabolism
/ Capsid - ultrastructure
/ Capsid protein
/ Capsid Proteins - chemistry
/ Capsid Proteins - genetics
/ Capsid Proteins - metabolism
/ Cryoelectron Microscopy
/ Deficient mutant
/ Enzymes
/ gag Gene Products, Human Immunodeficiency Virus - chemistry
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Gag protein
/ Genomes
/ Hexamers
/ HIV
/ HIV-1 - genetics
/ HIV-1 - metabolism
/ HIV-1 - physiology
/ Human immunodeficiency virus
/ Humanities and Social Sciences
/ Humans
/ Infections
/ Infectivity
/ Inositol
/ Inositols
/ Molecular dynamics
/ Molecular Dynamics Simulation
/ multidisciplinary
/ Mutation
/ Packaging
/ Phytic Acid - metabolism
/ Proteins
/ Science
/ Science (multidisciplinary)
/ Virion - metabolism
/ Virions
/ Virus Assembly - genetics
/ Viruses
2025
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Structural basis for HIV-1 capsid adaption to a deficiency in IP6 packaging
Journal Article
Structural basis for HIV-1 capsid adaption to a deficiency in IP6 packaging
2025
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Overview
Inositol hexakisphosphate (IP6) promotes HIV-1 assembly by stabilizing the immature Gag lattice and becomes enriched within virions, where it is required for mature capsid assembly. Previously, we identified Gag mutants that package little IP6 yet assemble particles, though they are non-infectious due to defective capsid formation. Here, we report a compensatory mutation, G225R, in the C-terminus of capsid protein (CA) that restores capsid assembly and infectivity in these IP6-deficient mutants. G225R also enhances in vitro assembly of CA into capsid-like particles at far lower IP6 concentrations than required for wild-type CA. CryoEM structures of G225R CA hexamers and lattices at 2.7 Å resolution reveal that the otherwise disordered C-terminus becomes structured, stabilizing hexamer-hexamer interfaces. Molecular dynamics simulations support this mechanism. These findings uncover how HIV-1 can adapt to IP6 deficiency and highlight a previously unrecognized structural role of the CA C-terminus, while offering tools for capsid-related studies.
IP6 is a critical host cofactor for HIV-1 assembly and infectivity. In this study, the authors uncover the structural basis by which HIV-1 adapts to a deficiency in IP6 packaging through a G225R mutation at the C-terminus of the capsid protein.
Publisher
Nature Publishing Group UK,Nature Publishing Group,Nature Portfolio
Subject
/ 631/45
/ 631/535
/ 631/57
/ Capsid Proteins - metabolism
/ Enzymes
/ gag Gene Products, Human Immunodeficiency Virus - chemistry
/ gag Gene Products, Human Immunodeficiency Virus - genetics
/ gag Gene Products, Human Immunodeficiency Virus - metabolism
/ Genomes
/ Hexamers
/ HIV
/ Human immunodeficiency virus
/ Humanities and Social Sciences
/ Humans
/ Inositol
/ Molecular Dynamics Simulation
/ Mutation
/ Proteins
/ Science
/ Virions
/ Viruses
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