Journal Article

Morphology, Carbohydrate Composition and Vernalization Response in a Genetically Diverse Collection of Asian and European Turnips (Brassica rapa subsp. rapa)

de Visser, Joan, Zhang, Ningwen, Basnet, Ram Kumar, Cheng, Feng, Fang, Wen, Wang, Xiaowu, Bucher, Johan, Zhao, Jianjun, Lens, Frederic, Bonnema, Guusje, Lin, Ke, Xiao, Dong, Menamo, Temesgen

2014

Overview

Brassica rapa displays enormous morphological diversity, with leafy vegetables, turnips and oil crops. Turnips (Brassica rapa subsp. rapa) represent one of the morphotypes, which form tubers and can be used to study the genetics underlying storage organ formation. In the present study we investigated several characteristics of an extensive turnip collection comprising 56 accessions from both Asia (mainly Japanese origin) and Europe. Population structure was calculated using data from 280 evenly distributed SNP markers over 56 turnip accessions. We studied the anatomy of turnip tubers and measured carbohydrate composition of the mature turnip tubers of a subset of the collection. The variation in 16 leaf traits, 12 tuber traits and flowering time was evaluated in five independent experiments for the entire collection. The effect of vernalization on flowering and tuber formation was also investigated. SNP marker profiling basically divided the turnip accessions into two subpopulations, with admixture, generally corresponding with geographical origin (Europe or Asia). The enlarged turnip tuber consists of both hypocotyl and root tissue, but the proportion of the two tissues differs between accessions. The ratio of sucrose to fructose and glucose differed among accessions, while generally starch content was low. The evaluated traits segregated in both subpopulations, with leaf shape, tuber colour and number of shoots per tuber explaining most variation between the two subpopulations. Vernalization resulted in reduced flowering time and smaller tubers for the Asian turnips whereas the European turnips were less affected by vernalization.

• Publisher: Public Library of Science,Public Library of Science (PLoS)
• Subject: Admixtures / arabidopsis-thaliana / Asia / Biology and Life Sciences / Brassica / Brassica rapa - anatomy & histology / Brassica rapa - chemistry / Brassica rapa - genetics / Brassica rapa rapa / Carbohydrate composition / Carbohydrates / Carbohydrates - chemistry / Carbohydrates - isolation & purification / Collection / Crops, Agricultural / Europe / Flowering / flowering-time / Flowers & plants / Flowers - genetics / Fructose / gene-expression / Genetic Variation / Genetics / Genomes / Genotype & phenotype / Germplasm / Glucose / Horticulture / Humans / Leaves / Morphology / organ development / Phenotype / Plant Leaves - genetics / Plant Roots - genetics / Plant sciences / Plant tissues / Population structure / Potatoes / Quantitative Trait Loci - genetics / raphanus-sativus l / Shoots / Single-nucleotide polymorphism / Starch / storage root-formation / Studies / Subpopulations / Sucrose / sucrose metabolizing enzymes / Sugar / sugar-beet / transcriptome analysis / tuber development / Tubers / Turnips / Vegetables / Vernalization